Concepedia

Cell Type-specific Pathway Analysis

Cell Type-Specific Pathway Analysis is a computational method within single-cell pathway analysis that identifies and characterizes biologically relevant signaling or metabolic pathways selectively active in individual cell types by integrating single-cell transcriptomic data with prior pathway knowledge.

12

Publications

2.4K

Citations

113

Authors

41

Institutions

Publications per year

2017–2026

8

Parents

Publications

12

Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted Therapies in Colon Cancer

Lei Zhang, Ziyi Li, Katarzyna M. Skrzypczynska et al. · Cell · 2020 · 1.6K citations · Full text

, , +16

Systematic single-cell pathway analysis to characterize early T cell activation

Jack Bibby, Divyansh Agarwal, Tilo Freiwald et al. · Cell Reports · 2022 · 156 citations · Full text

, , +14

CytoTalk: De novo construction of signal transduction networks using single-cell transcriptomic data

Yuxuan Hu, Tao Peng, Lin Gao et al. · Science Advances · 2021 · 144 citations · Full text

, , +17

Cell-specific expression and pathway analyses reveal alterations in trauma-related human T cell and monocyte pathways

Krzysztof Laudański, Carol Miller‐Graziano, Wenzhong Xiao et al. · Proceedings of the National Academy of Sciences · 2006 · 110 citations · Full text

, , +17

PyMINEr Finds Gene and Autocrine-Paracrine Networks from Human Islet scRNA-Seq

Scott R. Tyler, Pavana G. Rotti, Xingshen Sun et al. · Cell Reports · 2019 · 80 citations · Full text

, , +17

1–5 of 12

Authors

113

  1. MM
    Michael Mindrinos

    Stanford University, United States

    1 publications · 110 citations

    1

    h-index

  2. SC
    Seth Cohen

    Biogen (United States), United States

    1 publications · 37 citations

    1

    h-index

  3. DA
    Divyansh Agarwal

    University of Pennsylvania, United States

    1 publications · 156 citations

    1

    h-index

  4. JB
    Jack Bibby

    National Heart Lung and Blood Institute, United States

    1 publications · 156 citations

    1

    h-index

  5. EK
    Elli Kohen

    University of Miami, United States

    1 publications · 15 citations

    1

    h-index

1–5 of 113

Institutions

41

  1. University of Miami

    Coral Gables, United States

    2 h-index

    7 publications

    249 citations

  2. Harvard University

    Cambridge, United States

    2 h-index

    2 publications

    266 citations

  3. Massachusetts General Hospital

    Boston, United States

    2 h-index

    2 publications

    266 citations

  4. University of Pennsylvania

    Philadelphia, United States

    2 h-index

    2 publications

    300 citations

  5. National Institutes of Health

    Bethesda, United States

    2 h-index

    13 publications

    1.5K citations

  6. Vanderbilt University

    Nashville, United States

    1 h-index

    3 publications

    141 citations

  7. Xidian University

    Xi'an, China

    1 h-index

    2 publications

    288 citations

  8. Amgen (United States)

    Thousand Oaks, United States

    1 h-index

    14 publications

    23.1K citations

1–8 of 41

Venues

  1. Cell Reports

    2 publications · 236 citations

    2

    h-index

  2. Journal of Proteome Research

    JPR · 1 publications · 15 citations

    1

    h-index

  3. Molecular Neurobiology

    1 publications · 39 citations

    1

    h-index

  4. Science Signaling

    1 publications · 41 citations

    1

    h-index

  5. Cell

    1 publications · 1.6K citations

    1

    h-index

1–5