Concepedia

Cell State Visualization

Cell State Visualization is a single-cell data visualization method that specifically represents the dynamic functional identities of individual cells, such as activation, differentiation, or transitional states, within a low-dimensional embedding or graphical layout to facilitate biological interpretation.

25

Publications

2.7K

Citations

119

Authors

60

Institutions

Publications per year

2017–2026

14

Parents

Publications

25

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

El-ad David Amir, Kara L. Davis, Michelle D. Tadmor et al. · Nature Biotechnology · 2013 · 1.6K citations · Full text

, , +12

CellExplorer: A framework for visualizing and characterizing single neurons

Peter Petersen, Joshua H. Siegle, Nicholas A. Steinmetz et al. · Neuron · 2021 · 163 citations · Full text

, , +12

Visualizing Cell State Transition Using Raman Spectroscopy

Taro Ichimura, Liang‐da Chiu, Katsumasa Fujita et al. · PLoS ONE · 2014 · 105 citations · Full text

, , +17

Phantasus, a web application for visual and interactive gene expression analysis

Maksim Kleverov, Daria Zenkova, Vladislav Kamenev et al. · eLife · 2024 · 97 citations · Full text

, , +14

Establishing a conceptual framework for holistic cell states and state transitions

Susanne M. Rafelski, Julie A. Theriot · Cell · 2024 · 92 citations · Full text

, , +15

1–5 of 25

Authors

119

  1. MN
    Maxim N. Artyomov

    Washington University in St. Louis, United States

    2 publications · 117 citations

    2

    h-index

  2. MK
    Maksim Kleverov

    Washington University in St. Louis, United States

    2 publications · 117 citations

    2

    h-index

  3. AS
    Alexey Sergushichev

    ITMO University, Russia

    2 publications · 117 citations

    2

    h-index

  4. MS
    Margarita Sablina

    Washington University in St. Louis, United States

    2 publications · 117 citations

    2

    h-index

  5. DZ
    Daria Zenkova

    Washington University in St. Louis, United States

    2 publications · 117 citations

    2

    h-index

1–5 of 119

Institutions

60

  1. Broad Institute

    Cambridge, United States

    3 h-index

    14 publications

    609 citations

  2. Harvard University

    Cambridge, United States

    3 h-index

    16 publications

    668 citations

  3. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    4 publications

    335 citations

  4. ITMO University

    St Petersburg, Russia

    2 h-index

    11 publications

    605 citations

  5. Massachusetts General Hospital

    Boston, United States

    2 h-index

    2 publications

    130 citations

  6. University of Washington

    Seattle, United States

    2 h-index

    2 publications

    255 citations

  7. Washington University in St. Louis

    St Louis, United States

    2 h-index

    5 publications

    331 citations

  8. University of Sheffield

    Sheffield, United Kingdom

    1 h-index

    2 publications

    84 citations

1–8 of 60

Venues

  1. Bioinformatics

    3 publications · 126 citations

    3

    h-index

  2. Cell

    2 publications · 135 citations

    2

    h-index

  3. Cell Systems

    2 publications · 74 citations

    2

    h-index

  4. Molecular BioSystems

    1 publications · 12 citations

    1

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 20 citations

    1

    h-index

1–5