Concepedia

Cell Identity Annotation

Cell Identity Annotation is a computational method that assigns biologically meaningful cell type labels to individual cells based on their high-dimensional genomic profiles, distinguishing it from general clustering or dimensionality reduction techniques by its explicit focus on mapping cells to known or novel cell types within a biological taxonomy.

21

Publications

1.3K

Citations

136

Authors

64

Institutions

Publications per year

2017–2026

16

Parents

Publications

21

Gene signature extraction and cell identity recognition at the single-cell level with Cell-ID

Akira Cortal, Loredana Martignetti, Emmanuelle Six et al. · Nature Biotechnology · 2021 · 182 citations

, , +16

The evolving concept of cell identity in the single cell era

Samantha A. Morris · Development · 2019 · 165 citations

, , +17

scMatch: a single-cell gene expression profile annotation tool using reference datasets

Rui Hou, Elena Denisenko, Alistair R. R. Forrest · Bioinformatics · 2019 · 159 citations · Full text

, , +17

Semisupervised adversarial neural networks for single-cell classification

Jacob C. Kimmel, David R. Kelley · Genome Research · 2021 · 119 citations · Full text

, , +17

CellTagging: combinatorial indexing to simultaneously map lineage and identity at single-cell resolution

Wenjun Kong, Brent A. Biddy, Kenji Kamimoto et al. · Nature Protocols · 2020 · 99 citations · Full text

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1–5 of 21

Authors

136

  1. AR
    Alistair R. R. Forrest

    RIKEN Center for Integrative Medical Sciences, Japan

    2 publications · 182 citations

    2

    h-index

  2. JC
    Jacob C. Kimmel

    Enzo Life Sciences (United States), United States

    2 publications · 138 citations

    2

    h-index

  3. SA
    Samantha A. Morris

    Washington University in St. Louis, United States

    2 publications · 264 citations

    2

    h-index

  4. DR
    David R. Kelley

    Harvard University, United States

    2 publications · 138 citations

    2

    h-index

  5. SK
    Saul Kato

    University of California, San Francisco, United States

    1 publications · 17 citations

    1

    h-index

1–5 of 136

Institutions

64

  1. Harvard University

    Cambridge, United States

    2 h-index

    13 publications

    251 citations

  2. Enzo Life Sciences (United States)

    Farmingdale, United States

    2 h-index

    4 publications

    276 citations

  3. Washington University in St. Louis

    St Louis, United States

    2 h-index

    7 publications

    759 citations

  4. First Affiliated Hospital of Harbin Medical University

    Harbin, China

    1 h-index

    1 publications

    85 citations

  5. Research Organization of Information and Systems

    Tokyo, Japan

    1 h-index

    1 publications

    53 citations

  6. The University of Western Australia

    Perth, Australia

    1 h-index

    3 publications

    477 citations

  7. The Institute of Statistical Mathematics

    Tokyo, Japan

    1 h-index

    2 publications

    106 citations

  8. Vanderbilt University Medical Center

    Nashville, United States

    1 h-index

    4 publications

    92 citations

1–8 of 64

Venues

  1. Nature Communications

    3 publications · 164 citations

    3

    h-index

  2. Bioinformatics

    2 publications · 180 citations

    2

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 32 citations

    2

    h-index

  4. Development

    1 publications · 165 citations

    1

    h-index

  5. Nature Protocols

    1 publications · 99 citations

    1

    h-index

1–5