Jie Ren

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

Jie Ren, Nathan A. Ahlgren, Yang Young Lu et al. · Microbiome · 2017 · 702 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Identifying viruses from metagenomic data using deep learning

Jie Ren, Kai Song, Chao Deng et al. · Quantitative Biology · 2020 · 682 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Resurrection of endogenous retroviruses during aging reinforces senescence

Xiaoqian Liu, Zunpeng Liu, Zeming Wu et al. · Cell · 2023 · 362 citations · Full text

Life Sciences, Cell Biology, Molecular Biology +15

Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences

Nathan A. Ahlgren, Jie Ren, Yang Young Lu et al. · Nucleic Acids Research · 2016 · 350 citations · Full text

Life Sciences, Biology, Microbiology +15

Aging Atlas: a multi-omics database for aging biology

Guang‐Hui Liu, Yīmíng Bào, Jing Qu et al. · Nucleic Acids Research · 2020 · 344 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17