Nathan A. Ahlgren

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

Gabrielle Rocap, Frank W. Larimer, Jane E. Lamerdin et al. · Nature · 2003 · 1.2K citations · Full text

Biology, Microbial Diversity, Molecular Ecology +8

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

Jie Ren, Nathan A. Ahlgren, Yang Young Lu et al. · Microbiome · 2017 · 676 citations · Full text

Identifying viruses from metagenomic data using deep learning

Jie Ren, Kai Song, Chao Deng et al. · Quantitative Biology · 2020 · 632 citations · Full text

Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences

Nathan A. Ahlgren, Jie Ren, Yang Young Lu et al. · Nucleic Acids Research · 2016 · 332 citations · Full text

Copper toxicity and cyanobacteria ecology in the Sargasso Sea

Elizabeth L. Mann, Nathan A. Ahlgren, James W. Moffett et al. · Limnology and Oceanography · 2002 · 217 citations · Full text

Bioconcentration, Engineering, Copper Toxicity +17