Nathan A. Ahlgren

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

Gabrielle Rocap, Frank W. Larimer, Jane E. Lamerdin et al. · Nature · 2003 · 1.2K citations · Full text

Life Sciences, Biology, Evolutionary Biology +16

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

Jie Ren, Nathan A. Ahlgren, Yang Young Lu et al. · Microbiome · 2017 · 702 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Identifying viruses from metagenomic data using deep learning

Jie Ren, Kai Song, Chao Deng et al. · Quantitative Biology · 2020 · 682 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences

Nathan A. Ahlgren, Jie Ren, Yang Young Lu et al. · Nucleic Acids Research · 2016 · 350 citations · Full text

Life Sciences, Biology, Microbiology +15

Copper toxicity and cyanobacteria ecology in the Sargasso Sea

Elizabeth L. Mann, Nathan A. Ahlgren, James W. Moffett et al. · Limnology and Oceanography · 2002 · 220 citations · Full text

Life Sciences, Ecology, Oceanography +17