Yang Young Lu

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

Jie Ren, Nathan A. Ahlgren, Yang Young Lu et al. · Microbiome · 2017 · 702 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences

Nathan A. Ahlgren, Jie Ren, Yang Young Lu et al. · Nucleic Acids Research · 2016 · 350 citations · Full text

Life Sciences, Biology, Microbiology +15

COCACOLA: binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment and paired-end read LinkAge

Yang Young Lu, Ting Chen, Jed A. Fuhrman et al. · Bioinformatics · 2016 · 175 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Alignment-Free Sequence Analysis and Applications

Jie Ren, Xin Bai, Yang Young Lu et al. · Annual Review of Biomedical Data Science · 2018 · 118 citations · Full text

Life Sciences, Bioinformatics, Biology +16

SolidBin: improving metagenome binning with semi-supervised normalized cut

Ziye Wang, Zhengyang Wang, Yang Young Lu et al. · Bioinformatics · 2019 · 89 citations · Full text

Life Sciences, Bioinformatics, Genomics +13