Nathalie Pochet

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

Brian J. Haas, Alexie Papanicolaou, Moran Yassour et al. · Nature Protocols · 2013 · 9.1K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +16

Type I interferons and microbial metabolites of tryptophan modulate astrocyte activity and central nervous system inflammation via the aryl hydrocarbon receptor

Veit Rothhammer, Iván Mascanfroni, Lukas Bunse et al. · Nature Medicine · 2016 · 1.5K citations · Full text

Life Sciences, Immunology, Neuroscience +17

Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Brian J. Haas, Alexander Dobin, Bo Li et al. · Genome biology · 2019 · 694 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

Comprehensive comparative analysis of RNA sequencing methods for degraded or low input samples

Xian Adiconis, Diego Borges-Rivera, Rahul Satija et al. · Digital Access to Scholarship at Harvard (DASH) (Harvard University) · 2013 · 550 citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +14

FLO1 Is a Variable Green Beard Gene that Drives Biofilm-like Cooperation in Budding Yeast

Scott Smukalla, Marina Caldara, Nathalie Pochet et al. · Cell · 2008 · 475 citations · Full text

Life Sciences, Genetics, Molecular Biology +10