Pau Badia-i-Mompel

decoupleR: ensemble of computational methods to infer biological activities from omics data

Pau Badia-i-Mompel, Jesús Vélez Santiago, Jana M. Braunger et al. · Bioinformatics Advances · 2022 · 844 citations · Full text

Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities

Sophia Müller‐Dott, Eirini Tsirvouli, Miguél Vázquez et al. · Nucleic Acids Research · 2023 · 267 citations · Full text

Collectri Meta-resource, Molecular Biology, Transcriptomics Technology +21

Molecular consequences of SARS-CoV-2 liver tropism

Nicola Wanner, Geoffroy Andrieux, Pau Badia-i-Mompel et al. · Nature Metabolism · 2022 · 158 citations · Full text

LIANA+ provides an all-in-one framework for cell–cell communication inference

Daniel Dimitrov, Philipp Schäfer, Elias Farr et al. · Nature Cell Biology · 2024 · 146 citations · Full text

Engineering, Extensive Vignettes, Molecular Biology +21

Bioactivity descriptors for uncharacterized chemical compounds

Martino Bertoni, Miquel Duran‐Frigola, Pau Badia-i-Mompel et al. · Nature Communications · 2021 · 95 citations · Full text