Daniel Dimitrov

decoupleR: ensemble of computational methods to infer biological activities from omics data

Pau Badia-i-Mompel, Jesús Vélez Santiago, Jana M. Braunger et al. · Bioinformatics Advances · 2022 · 844 citations · Full text

Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data

Daniel Dimitrov, Dénes Türei, Martín Garrido‐Rodríguez et al. · Nature Communications · 2022 · 509 citations · Full text

LIANA+ provides an all-in-one framework for cell–cell communication inference

Daniel Dimitrov, Philipp Schäfer, Elias Farr et al. · Nature Cell Biology · 2024 · 146 citations · Full text

Engineering, Extensive Vignettes, Molecular Biology +21

Single-cell integration reveals metaplasia in inflammatory gut diseases

Amanda J. Oliver, Ni Huang, Raquel Bartolomé-Casado et al. · Nature · 2024 · 54 citations · Full text

Integrating single-cell multi-omics and prior biological knowledge for a functional characterization of the immune system

Philipp Schäfer, Daniel Dimitrov, Eduardo J. Villablanca et al. · Nature Immunology · 2024 · 44 citations

Autoimmune Disease, Single-cell Multi-omics, Medicine +15