Sophia Müller‐Dott

decoupleR: ensemble of computational methods to infer biological activities from omics data

Pau Badia-i-Mompel, Jesús Vélez Santiago, Jana M. Braunger et al. · Bioinformatics Advances · 2022 · 844 citations · Full text

Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities

Sophia Müller‐Dott, Eirini Tsirvouli, Miguél Vázquez et al. · Nucleic Acids Research · 2023 · 267 citations · Full text

Collectri Meta-resource, Molecular Biology, Transcriptomics Technology +21

<scp>GRaNIE</scp> and <scp>GRaNPA</scp> : inference and evaluation of enhancer‐mediated gene regulatory networks

Aryan Kamal, Christian Arnold, Annique Claringbould et al. · Molecular Systems Biology · 2023 · 59 citations · Full text

Expanding the coverage of regulons from high-confidence prior knowledge for accurate estimation of transcription factor activities

Sophia Müller‐Dott, Eirini Tsirvouli, Miguél Vázquez et al. · 2023 · 34 citations · Full text

Molecular Biology, Transcriptomics Technology, Gene Regulatory Network +23

decoupleR: Ensemble of computational methods to infer biological activities from omics data

Pau Badia-i-Mompel, Jesús Vélez, Jana M. Braunger et al. · 2021 · 30 citations · Full text