Sandhya Prabhakaran

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

Elham Azizi, Ambrose Carr, George Plitas et al. · Cell · 2018 · 2K citations · Full text

Breast Tumor Microenvironment, Breast Oncology, Cancer Immunosurveillance +13

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations

Francesca Di Giallonardo, Armin Töpfer, Mélanie Rey et al. · Nucleic Acids Research · 2014 · 159 citations · Full text

Genetics, Viral Polymerase Mechanism, Genomics +19

Ovarian cancer immunogenicity is governed by a narrow subset of progenitor tissue-resident memory T cells

Carmen M. Anadon, Xiaoqing Yu, Kay Hänggi et al. · Cancer Cell · 2022 · 157 citations · Full text

Probabilistic Inference of Viral Quasispecies Subject to Recombination

Armin Töpfer, Osvaldo Zagordi, Sandhya Prabhakaran et al. · Journal of Computational Biology · 2013 · 154 citations

Recombination Events, Viral Evolution, Genetics +14

HIV Haplotype Inference Using a Propagating Dirichlet Process Mixture Model

Sandhya Prabhakaran, Mélanie Rey, Osvaldo Zagordi et al. · IEEE/ACM Transactions on Computational Biology and Bioinformatics · 2013 · 115 citations

Engineering, High Throughput Sequencing, Data Science +19