Philippe Chlenski

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities

James J. Davis, Alice R. Wattam, Ramy K. Aziz et al. · Nucleic Acids Research · 2019 · 945 citations · Full text

Engineering, Comparative Analysis Tools, Genetics +23

Accurate and robust inference of microbial growth dynamics from metagenomic sequencing reveals personalized growth rates

Tyler Joseph, Philippe Chlenski, Aviya Litman et al. · Genome Research · 2022 · 56 citations · Full text

A machine learning-based service for estimating quality of genomes using PATRIC

Bruce Parrello, Rory Butler, Philippe Chlenski et al. · BMC Bioinformatics · 2019 · 49 citations · Full text

Supervised extraction of near-complete genomes from metagenomic samples: A new service in PATRIC

Bruce Parrello, Rory Butler, Philippe Chlenski et al. · PLoS ONE · 2021 · 20 citations · Full text

Engineering, Genetics, Reference Genomes +21

Engineering of increased L-Threonine production in bacteria by combinatorial cloning and machine learning

P D Hanke, Bruce Parrello, Olga Vasieva et al. · Metabolic Engineering Communications · 2023 · 10 citations · Full text