Žiga Avsec

Accurate proteome-wide missense variant effect prediction with AlphaMissense

Jun Cheng, Guido Novati, Joshua Pan et al. · Science · 2023 · 1.8K citations

Genetics, Genetic Epidemiology, Genomics +16

Effective gene expression prediction from sequence by integrating long-range interactions

Žiga Avsec, Vikram Agarwal, Daniel Visentin et al. · Nature Methods · 2021 · 1.1K citations · Full text

Base-resolution models of transcription-factor binding reveal soft motif syntax

Žiga Avsec, Melanie Weilert, Avanti Shrikumar et al. · Nature Genetics · 2021 · 646 citations · Full text

Sequence Motif, Natural Sciences, Molecular Biology +5

Mapping single-cell data to reference atlases by transfer learning

Mohammad Lotfollahi, Mohsen Naghipourfar, Malte D. Luecken et al. · Nature Biotechnology · 2021 · 583 citations · Full text

MMSplice: modular modeling improves the predictions of genetic variant effects on splicing

Jun Cheng, Thi Yen Duong Nguyen, Kamil J. Cygan et al. · Genome biology · 2019 · 257 citations · Full text