Concepedia

A single-cell transcriptome atlas of human euploid and aneuploid blastocysts

Shengpeng Wang, Lizhi Leng, Quanlei Wang, Yifan Gu, Jinlu Li, Yanru An, Qiuting Deng, Pingyuan Xie, Can Cheng, Xueqin Chen,

Nature Genetics · 2024 · 16 citations · 73 references

Concepts

Life SciencesBioinformaticsGeneticsGenomicsSingle-cell BioinformaticsTranscriptomicsAneuploidyBlastocyst DevelopmentSingle-cell AnalysisSingle-cell GenomicsSingle-cell Rna Sequencing AnalysisSingle-cell TranscriptomicsAneuploidy In BlastocystsAneuploidy In Preimplantation EmbryosCell Atlas ConstructionPolyploid TranscriptomicsSingle-cell Analysis Of EmbryosSingle-cell Transcriptomics Of Early EmbryosTranscriptomics Of Blastocysts

References

73

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

Life Sciences, Bioinformatics, Biology +12

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

Life Sciences, Bioinformatics, Biostatistics +14

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han et al. · OMICS A Journal of Integrative Biology · 2012 · 38.3K citations

Life Sciences, Bioinformatics, Biology +13

HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 26.1K citations · Full text

Engineering, Computer Engineering, Computer Science +3

Integrated analysis of multimodal single-cell data

Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen et al. · Cell · 2021 · 16K citations · Full text

Life Sciences, Bioinformatics, Immunology +17