Concepedia

MHC-Fine: Fine-tuned AlphaFold for precise MHC-peptide complex prediction

Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko, Y. Zhu, Thu Nguyen, George Jones, Taras Patsahan, Carlos Simmerling, Julie C. Mitchell, Sándor Vajda,

Biophysical Journal · 2024 · 14 citations · 26 references

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26

The Protein Data Bank

Helen M. Berman · Nucleic Acids Research · 2000 · 39.8K citations

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ColabFold: making protein folding accessible to all

Milot Mirdita, Konstantin Schütze, Yoshitaka Moriwaki et al. · Nature Methods · 2022 · 9.7K citations · Full text

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Accurate prediction of protein structures and interactions using a three-track neural network

Minkyung Baek, Frank DiMaio, Ivan Anishchenko et al. · Science · 2021 · 5.7K citations · Full text

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MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets

Martin Steinegger, Johannes Söding · Nature Biotechnology · 2017 · 5.1K citations

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Evolutionary-scale prediction of atomic-level protein structure with a language model

Zeming Lin, Halil Akin, Roshan Rao et al. · Science · 2023 · 4.9K citations · Full text

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