Darya Stepanenko

Statistics

Publications

Citations

115

H-Index

Active since

2021

Affiliations

Stony Brook University(Current)

Boston University

Yukhnovskii Institute for Condensed Matter Physics of the National Academy of Sciences of Ukraine

Oak Ridge National Laboratory

Lviv Polytechnic National University

Darya Stepanenko is an author at Stony Brook University specializing in structural biology, binding energy landscape, and allosteric regulation modeling.

ORCID

Publications per year

2021–2025

Publications

Free Energy Landscapes from SARS-CoV-2 Spike Glycoprotein Simulations Suggest that RBD Opening Can Be Modulated via Interactions in an Allosteric Pocket

Lucy Fallon, Kellon Belfon, Lauren Raguette et al. · Journal of the American Chemical Society · 2021 · 76 citations · Full text

Life Sciences, Biophysics, Infectious Diseases +17

Modeling Protein–Protein and Protein–Ligand Interactions by the <scp>ClusPro</scp> Team in <scp>CASP16</scp>

Ryota Ashizawa, Sergei Kotelnikov, Omeir Khan et al. · Proteins Structure Function and Bioinformatics · 2025 · 15 citations · Full text

Life Sciences, Bioinformatics, Computational Chemistry +16

MHC-Fine: Fine-tuned AlphaFold for precise MHC-peptide complex prediction

Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko et al. · Biophysical Journal · 2024 · 14 citations · Full text

Life Sciences, Immunology, Molecular Biology +14

MHC-Fine: Fine-tuned AlphaFold for Precise MHC-Peptide Complex Prediction

Ernest Glukhov, Dmytro Kalitin, Darya Stepanenko et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2023 · 10 citations · Full text

Life Sciences, Bioinformatics, Immunology +17

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