Concepedia

Macrophyte coverage drives microbial community structure and interactions in a shallow sub-tropical lake

Maximiliano Barbosa, Forrest W. Lefler, David E. Berthold, Lyn A. Gettys, James J. Leary, Haywood Dail Laughinghouse

The Science of The Total Environment · 2024 · 14 citations · 73 references

DOI

Concepts

References

73

R: A Language and Environment for Statistical Computing

R Core Team · 2000 · 353K citations · Full text

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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text

, , +17

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

, , +9

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al. · Nucleic Acids Research · 2012 · 34K citations · Full text

, , +17

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

, , +15