Concepedia

Single-cell multi-omics sequencing of human spermatogenesis reveals a DNA demethylation event associated with male meiotic recombination

Yaping Huang, Lin Li, Geng An, Xinyan Yang, Manman Cui, Xiuling Song, J.-H. Lin, Xiaoling Zhang, Zhaokai Yao, Cong Wan,

Nature Cell Biology · 2023 · 58 citations · 88 references

DOI

Concepts

References

88

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

, , +13

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

HTSeq—a Python framework to work with high-throughput sequencing data

Simon Anders, Paul Theodor Pyl, Wolfgang Huber · Bioinformatics · 2014 · 22.7K citations · Full text

, , +11

An integrated encyclopedia of DNA elements in the human genome

Nature · 2012 · 19.4K citations · Full text

, , +16