Multi-omics analysis revealed anthocyanin accumulation differences in purple tea plants ‘Ziyan’, ‘Zijuan’ and their dark-purple hybrid

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

Yang Liao, Gordon K. Smyth, Wei Shi · Bioinformatics · 2013 · 29.1K citations · Full text

Life Sciences, Bioinformatics, Biology +14

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

Kai Wang, Man Li, Håkon Håkonarson · Nucleic Acids Research · 2010 · 15.6K citations · Full text

Life Sciences, Bioinformatics, Genetics +17

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +10

Revising how the computer program <scp>cervus</scp> accommodates genotyping error increases success in paternity assignment

Steven T. Kalinowski, Mark L. Taper, Tristan Marshall · Molecular Ecology · 2007 · 5.3K citations

Agriculture, Animal Sciences, Genetics +11

Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors

Eugenio Butelli, Lucilla Titta, Marco Giorgio et al. · Nature Biotechnology · 2008 · 1.3K citations

Life Sciences, Plant Biology, Plant Sciences +16