Mihaela Pertea

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +10

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

Mihaela Pertea, Daehwan Kim, Geo Pertea et al. · Nature Protocols · 2016 · 7.6K citations

Life Sciences, Bioinformatics, Molecular Biology +10

Genome sequence of the human malaria parasite Plasmodium falciparum

Malcolm J. Gardner, Neil Hall, Eula Fung et al. · Nature · 2002 · 4.5K citations · Full text

Life Sciences, Genetics, Molecular Genetics +13

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

Brian J. Haas, Steven L. Salzberg, Wei Zhu et al. · Genome biology · 2008 · 4.4K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +15

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

Sam Kovaka, Aleksey V. Zimin, Geo Pertea et al. · Genome biology · 2019 · 2.1K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17