Nature Communications · 2023 · 28 citations · 73 references
Life SciencesCell BiologyMolecular BiologyChromatin StructureProtein TranslationProtein-protein InteractionsCo-translational FoldingCo-translational Protein FoldingProtein SynthesisRibosome ProfilingTranslation In EukaryotesTranslation In ProkaryotesImportin-mediated Nuclear ImportNascent Chain FoldingNascent Polypeptide FoldingNuclear Protein ImportProtein Nuclear ImportProteostasisRibosome-associated ChaperonesRibosome-nascent Chain Interactions
Various cellular quality control mechanisms support proteostasis. While, ribosome-associated chaperones prevent the misfolding of nascent chains during translation, importins were shown to prevent the aggregation of specific cargoes in a post-translational mechanism prior the import into the nucleoplasm. Here, we hypothesize that importins may already bind ribosome-associated cargo in a co-translational manner. We systematically measure the nascent chain association of all importins in Saccharomyces cerevisiae by selective ribosome profiling. We identify a subset of importins that bind to a wide range of nascent, often uncharacterized cargoes. This includes ribosomal proteins, chromatin remodelers and RNA binding proteins that are aggregation prone in the cytosol. We show that importins act consecutively with other ribosome-associated chaperones. Thus, the nuclear import system is directly intertwined with nascent chain folding and chaperoning.
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Highly accurate protein structure prediction with AlphaFold
John Jumper, Alexander Pritzel, Tim Green et al. · Nature · 2021 · 45.2K citations · Full text
Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text