ChemBioChem · 2023 · 13 citations · 21 references
PharmacyMedicinal ChemistryMolecular BiologyDrug DesignDrug DiscoveryStructure-activity RelationshipsLigand BindingMolecular DockingProtein-ligand DockingRna InterferenceRna-binding ProteinsRna-protein InteractionsChemical Biology ProbesMolecular Docking AnalysisMolecular Docking Of InhibitorsSpirocyclic ScaffoldsSpirocyclization-based Probes
Small-molecule inhibitors of the RNA-binding and regulating protein LIN28 have the potential to be developed as chemical probes for biological perturbation and as therapeutic candidates. Reported small molecules disrupting the interaction between LIN28 and let-7 miRNA suffer from moderate to weak inhibitory activity and flat structure-activity relationship, which hindered the development of next-generation LIN28 inhibitors that warrant further evaluations. We report herein the identification of new LIN28 inhibitors utilizing a spirocyclization strategy based on a chromenopyrazole scaffold. Representative compounds 2-5 showed potent in vitro inhibitory activity against LIN28-let-7 interaction and single-digit micromolar potency in inhibiting the proliferation of LIN28-expressing JAR cancer cells. The spirocyclic compound 5 incorporated a position that is amenable for functional group appendage and further structural modifications. The binding mode of compound 5 with the LIN28 cold shock domain was rationalized via a molecular docking analysis.
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Lin28 promotes transformation and is associated with advanced human malignancies
Srinivas R. Viswanathan, John T. Powers, William S. Einhorn et al. · Nature Genetics · 2009 · 820 citations · Full text
Lin28A and Lin28B Inhibit let-7 MicroRNA Biogenesis by Distinct Mechanisms
Elena Piskounova, Christos Polytarchou, James E. Thornton et al. · Cell · 2011 · 613 citations · Full text
Molecular Basis for Interaction of let-7 MicroRNAs with Lin28
Yunsun Nam, Casandra Chen, Richard I. Gregory et al. · Cell · 2011 · 369 citations · Full text