Frontiers in Immunology · 2022 · 125 citations · 24 references
Life SciencesGeneticsMicrobiologyEpidemiologyGenetic EpidemiologyMicrobiome ResearchDiabetic RetinopathyDisease Risk AssessmentGut MicrobiomeGut MicrobiotaMendelian RandomizationMicrobiome DiversityCausal Effects IdentificationCausal Effects Of Genetic VariantsCausal HypothesesCausal MarkersGut Microbiome DiversityGut Microbiota EffectsInverse Variance Weighted EstimationProtective Factors Analysis
Background Previous researches have implicated a vital association between gut microbiota (GM) and diabetic retinopathy (DR) based on the association of the “gut-retina” axis. But their causal relationship has not been elucidated. Methods Instrumental variables of 211 GM taxa were obtained from genome wide association study (GWAS), and Mendelian randomization study was carried out to estimate their effects on DR risk from FinnGen GWAS (14,584 DR cases and 202,082 controls). Inverse variance weighted (IVW) is the main method to analyze causality, and MR results are verified by several sensitive analyses. Results As for 211 GM taxa, IVW results confirmed that family- Christensenellaceae ( P = 1.36×10 -2 ) and family- Peptococcaceae ( P = 3.13×10 -2 ) were protective factors for DR. Genus- Ruminococcaceae_UCG_011 ( P = 4.83×10 -3 ), genus- Eubacterium_rectale_group ( P = 3.44×10 -2 ) and genus- Adlercreutzia ( P = 4.82×10 -2 ) were correlated with the risk of DR. At the phylum, class and order levels, we found no GM taxa that were causally related to DR ( P >0.05). Heterogeneity ( P >0.05) and pleiotropy ( P >0.05) analysis confirmed the robustness of MR results. Conclusion We confirmed that there was a potential causal relationship between some GM taxa and DR, which highlights the association of the “gut-retina” axis and offered new insights into the GM-mediated mechanism of DR. Further explorations of their association are required and will lead to find new biomarkers for targeted prevention strategies of DR.
24
A metagenome-wide association study of gut microbiota in type 2 diabetes
Junjie Qin, Yingrui Li, Zhiming Cai et al. · Nature · 2012 · 7K citations · Full text
Gut Microbiota in Human Adults with Type 2 Diabetes Differs from Non-Diabetic Adults
Nadja Larsen, Finn K. Vogensen, Frans van den Berg et al. · PLoS ONE · 2010 · 3K citations · Full text