mSystems · 2022 · 39 citations · 29 references
Life SciencesCancer BiologyMicrobiologyBacteriologyMicrobial EcologyMicrobiome ResearchGut MicrobiotaLactic Acid BacteriaMicrobiome DysbiosisMicrobiome FunctionMilk Microbial EcologyMilk MicrofloraBreast Lesion DiagnosisCancer-associated Microbiome BiomarkersFunctional PotentialMicrobial Etiology Of CancerMicrobiome-associated CarcinogenesisMilk Microbiome AnalysisMilk Microbiota Composition
The goal of this study was to determine the role of resident breast tissue bacteria in breast cancer development. We analyzed breast tissue bacteria in healthy breast tissue and breast tissue donated prior to (precancerous) and after (postcancerous) breast cancer diagnosis. Compared to healthy tissue, the precancerous and postcancerous breast tissues demonstrated differences in the amounts of breast tissue bacteria. In addition, breast tissue bacteria exhibit different functions in pre-cancerous and post-cancerous breast tissues relative to healthy tissue. These differences in function are further emphasized by altered associations of the breast tissue bacteria with gene expression in the human host prior to cancer development. Collectively, these analyses identified shifts in bacterial abundance and metabolic function (dysbiosis) prior to breast tumor diagnosis. This dysbiosis may serve as a therapeutic target in breast cancer prevention.
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STAR: ultrafast universal RNA-seq aligner
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DADA2: High-resolution sample inference from Illumina amplicon data
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