Concepedia

Microbiomes of microscopic marine invertebrates do not reveal signatures of phylosymbiosis

Vittorio Boscaro, Corey C. Holt, Niels W. L. Van Steenkiste, María Herranz, Nicholas A. T. Irwin, Krzysztofa Grzelak, Oleksandr Holovachov, A. Kerbl, Varsha Mathur, Naoki Okamoto,

Nature Microbiology · 2022 · 79 citations · 48 references

DOI

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References

48

Random Forests

Leo Breiman · Machine Learning · 2001 · 126.2K citations · Full text

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

, , +15

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

, , +9

Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text

, , +8

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

, , +15