mSystems · 2022 · 88 citations · 89 references
Life SciencesBiologyMicrobiologyGenomicsMicrobial EcologyMicrobiome ResearchMetagenome AssemblyMetagenomic AnalysisMicrobial PhylogenomicsMicrobiome DiversityMicrobiome FunctionMolecular Evolution In MicrobesMetagenome-assembled Genome AnalysisMetagenome-assembled GenomesMetagenomic Phylogenomics
Kelp (brown algae in the order Laminariales ) are foundational species that create essential habitat in temperate and arctic coastal marine ecosystems. These photosynthetic giants host millions of microbial taxa whose functions are relatively unknown, despite their potential importance for host-microbe interactions and nutrient cycling in kelp forest ecosystems.
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The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations