Concepedia

Widespread prevalence and molecular epidemiology of tet(X4) and mcr-1 harboring Escherichia coli isolated from chickens in Pakistan

Ruichao Li, Xiaoyu Lu, Asim Munir, Sabahat Abdullah, Yuan Liu, Xia Xiao, Zhiqiang Wang, Mashkoor Mohsin

The Science of The Total Environment · 2021 · 42 citations · 34 references

DOI

Concepts

References

34

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

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Prokka: rapid prokaryotic genome annotation

Torsten Seemann · Bioinformatics · 2014 · 19.6K citations

, , +13

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

Ivica Letunić, Peer Bork · Nucleic Acids Research · 2021 · 11.7K citations · Full text

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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R. Wick, Louise M. Judd, Claire L. Gorrie et al. · PLoS Computational Biology · 2017 · 8.8K citations · Full text

, , +15

Roary: rapid large-scale prokaryote pan genome analysis

Andrew J. Page, Carla Cummins, Martin Hunt et al. · Bioinformatics · 2015 · 5.9K citations · Full text

, , +13