Analytical Chemistry · 2021 · 12 citations · 22 references
EngineeringBioengineeringBiomedical EngineeringBiomemsDownstream ProcessingMolecular BioengineeringMicrofluidic Device FabricationMicrofluidic DevicesMicrofluidic SystemsMicrofluidicsDigital PcrDroplet-based ScreeningEnzymatic AssaysFluorescent Dye LabelingFluorescent LabelingMicrofluidic ScreeningMultiplex Polymerase Chain Reaction (Pcr)Pressure Difference
Droplet microfluidics with picoinjection provides significant advantages to multistep reactions and screenings. The T-junction design for picoinjection is convenient in adding picoliter reagents into passing droplets to initiate reactions. However, conventional picoinjectors face difficulties in eliminating cross-contamination between droplets, preventing them from widespread use in sensitive biological and molecular assays. Here, we introduce stepinjection, which uses a T-junction with a stepped channel design to elevate the diffusional buffer zone into the main channel and consequently increases the pressure difference between droplets and the inlet of the injection channel. To demonstrate the stepinjector's ability to perform contamination-sensitive enzymatic assays, we inject casein fluorescein isothiocyanate (FITC-casein) into a mixture of savinase and savinase-free (labeled with a red fluorescent dye) droplets. We observe no cross-contamination using stepinjection but find a severe cross-talk using an optimal picoinjection design. We envision that the simple, tunable, and reliable stepinjector can be easily integrated in various droplet processing devices, and facilitate various biomedical and biochemical applications including multiplex digital PCR, single-cell sequencing, and enzymatic screening.
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Single-cell analysis and sorting using droplet-based microfluidics
Linas Mažutis, John Gilbert, W. Lloyd Ung et al. · Nature Protocols · 2013 · 1.4K citations
Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state
Assaf Rotem, Oren Ram, Noam Shoresh et al. · Nature Biotechnology · 2015 · 887 citations · Full text