Arthritis & Rheumatology · 2021 · 28 citations · 49 references
In GPA, significant changes occur in the nasal microbiome over time and are associated with disease activity. The occurrence of these changes months prior to the onset of relapse supports a pathogenic role of nasal bacteria in GPA. Our results uphold existing hypotheses implicating Staphylococcus as an instigator of disease and have generated a novel finding involving Corynebacterium as a potential mediator of disease in GPA.
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DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 33.5K citations · Full text
Illumina Amplicon Data, Omics Datasets, Spectral Searching +5
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price, Paramvir Dehal, Adam P. Arkin · PLoS ONE · 2010 · 15.1K citations · Full text