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Characterization of Lysinibacillus fusiformis strain S4C11: In vitro, in planta, and in silico analyses reveal a plant-beneficial microbe

Alessandro Passera, Marzia Rossato, John S. Oliver, Giovanna Battelli, Gul-i-Rayna Shahzad, Emanuela Cosentino, Jay M. Sage, Silvia Laura Toffolatti, Giulia Lopatriello, Jennifer R. Davis,

Microbiological Research · 2020 · 43 citations · 59 references

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59

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Kenneth J. Livak, Thomas D. Schmittgen · Methods · 2001 · 176.9K citations

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BLAST+: architecture and applications

Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 21.8K citations · Full text

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino, Ewan Birney · Genome Research · 2008 · 9.6K citations · Full text

SOAPdenovo2: an empirically improved memory-efficient short-read <i>de novo</i> assembler

Ruibang Luo, Binghang Liu, Yinlong Xie et al. · GigaScience · 2012 · 5.5K citations · Full text

The Pfam protein families database in 2019

Sara El-Gebali, Jaina Mistry, Alex Bateman et al. · Nucleic Acids Research · 2018 · 4.9K citations · Full text

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