mSystems · 2020 · 68 citations · 54 references
Life SciencesBiologyMicrobiologyMetagenomicsMicrobial EcologyMicrobial TaxonomyEnvironmental MetagenomicsEnvironmental Microbial GenomicsFunctional MetagenomicsMangrove BiodiversityMangrove EcologyMicrobial Community ProfilingCoastal EcosystemsMangrove CommunitiesMangrove EcosystemsMangrove Microbial DiversityMangrove MicrobiologyMetagenomic SequencingMicrobial MetagenomicsShotgun Metagenomic Analysis
This study comprehensively described the taxonomy and functionality of mangrove microbiomes, including their capacity for secondary metabolite biosynthesis and their ability to resist antibiotics. The microbial taxonomic and functional characteristics differed between geographical locations, corresponding to the environmental condition of two diverse mangrove regions. A large number of microbial biosynthetic gene clusters encoding novel bioactivities were found, and this can serve as a valuable resource to guide novel bioactive compound discovery for potential clinical uses.
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Fast gapped-read alignment with Bowtie 2
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KEGG: Kyoto Encyclopedia of Genes and Genomes
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KEGG: Kyoto Encyclopedia of Genes and Genomes
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Fast and sensitive protein alignment using DIAMOND
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