Concepedia

Metagenomic Sequencing

Metagenomic Sequencing is a genome sequencing methodology that directly samples and analyzes genetic material from environmental or clinical specimens without prior isolation or culturing of individual organisms, enabling comprehensive profiling of microbial communities at the ecosystem level.

2K

Publications

178.7K

Citations

15K

Authors

3.2K

Institutions

Publications per year

2017–2026

1.5K

Variants

Environmental Shotgun Sequencing

Parents

Publications

2K

A human gut microbial gene catalogue established by metagenomic sequencing

Junjie Qin, Ruiqiang Li, Jeroen Raes et al. · Nature · 2010 · 11.7K citations · Full text

, , +17

Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

Nicole M. Davis, Diana M. Proctor, Susan Holmes et al. · Microbiome · 2018 · 3.5K citations · Full text

, , +16

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

Susannah J. Salter, Michael J. Cox, Elena M. Turek et al. · BMC Biology · 2014 · 3.5K citations · Full text

, , +17

MEGAN analysis of metagenomic data

Daniel H. Huson, Alexander F. Auch, Ji Qi et al. · Genome Research · 2007 · 3.5K citations · Full text

, , +17

IDBA-UD: a <i>de novo</i> assembler for single-cell and metagenomic sequencing data with highly uneven depth

Yu Peng, Henry C. M. Leung, Siu‐Ming Yiu et al. · Bioinformatics · 2012 · 3.2K citations · Full text

, , +17

1–5 of 2K

Authors

15K

  1. JL
    Joseph L. DeRisi

    University of California, San Francisco, United States

    28 publications · 4.9K citations

    24

    h-index

  2. CY
    Charles Y. Chiu

    University of California, San Francisco, United States

    16 publications · 3.9K citations

    16

    h-index

  3. MR
    Michael R. Wilson

    University of California, San Francisco, United States

    14 publications · 2.9K citations

    14

    h-index

  4. SM
    Steve Miller

    University of California, San Francisco, United States

    14 publications · 3.7K citations

    14

    h-index

  5. DW
    Derrick W. Crook

    University of Oxford, United Kingdom

    13 publications · 957 citations

    13

    h-index

1–5 of 15K

Institutions

3.2K

  1. University of California, San Francisco

    San Francisco, United States

    41 h-index

    343 publications

    55K citations

  2. Chinese Academy of Sciences

    Beijing, China

    35 h-index

    254 publications

    13.3K citations

  3. Harvard University

    Cambridge, United States

    33 h-index

    152 publications

    25.2K citations

  4. University of California San Diego

    San Diego, United States

    30 h-index

    225 publications

    24.2K citations

  5. BGI Group (China)

    Shenzhen, China

    29 h-index

    189 publications

    288K citations

  6. Chan Zuckerberg Initiative (United States)

    Redwood City, United States

    28 h-index

    145 publications

    20.7K citations

  7. University of Oxford

    Oxford, United Kingdom

    28 h-index

    239 publications

    20.6K citations

  8. Chinese Academy of Medical Sciences & Peking Union Medical College

    Beijing, China

    27 h-index

    213 publications

    14K citations

1–8 of 3.2K

Venues

  1. Frontiers in Microbiology

    132 publications · 6.2K citations

    47

    h-index

  2. Scientific Reports

    100 publications · 7K citations

    46

    h-index

  3. PLoS ONE

    90 publications · 8.2K citations

    45

    h-index

  4. Microbiome

    56 publications · 9.9K citations

    41

    h-index

  5. Nature Communications

    35 publications · 6.8K citations

    31

    h-index

1–5