Communications Biology · 2020 · 32 citations · 61 references
Life SciencesBioengineeringBiotechnologyCell TherapyRegenerative MedicineStem Cell BiologyPluripotent Stem CellsStem Cell BioengineeringStem Cell DifferentiationStem Cell MechanobiologyStem Cell ReprogrammingBioreactor-based Cell ExpansionCell Surface Marker AnalysisNaive Pluripotency InductionNaïve PluripotencyPluripotencyPluripotency InductionPrimed PluripotencyTranscriptomic Profiles
Due to their ability to standardize key physiological parameters, stirred suspension bioreactors can potentially scale the production of quality-controlled pluripotent stem cells (PSCs) for cell therapy application. Because of differences in bioreactor expansion efficiency between mouse (m) and human (h) PSCs, we investigated if conversion of hPSCs, from the conventional "primed" pluripotent state towards the "naïve" state prevalent in mPSCs, could be used to enhance hPSC production. Through transcriptomic enrichment of mechano-sensing signaling, the expression of epigenetic regulators, metabolomics, and cell-surface protein marker analyses, we show that the stirred suspension bioreactor environment helps maintain a naïve-like pluripotent state. Our research corroborates that converting hPSCs towards a naïve state enhances hPSC manufacturing and indicates a potentially important role for the stirred suspension bioreactor's mechanical environment in maintaining naïve-like pluripotency.
61
NIH Image to ImageJ: 25 years of image analysis
Caroline A Schneider, Wayne Rasband, Kevin W. Eliceiri · Nature Methods · 2012 · 65.2K citations
Differential expression analysis for sequence count data
Simon Anders, Wolfgang Huber · Genome biology · 2010 · 16.4K citations · Full text
Near-optimal probabilistic RNA-seq quantification
Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 11K citations · Full text
Derivation of novel human ground state naive pluripotent stem cells
Ohad Gafni, Leehee Weinberger, Abed AlFatah Mansour et al. · Nature · 2013 · 1.1K citations