Concepedia

Pan-genome analysis of Paenibacillus polymyxa strains reveals the mechanism of plant growth promotion and biocontrol

Liangliang Zhou, Ting Zhang, Shan Tang, Xueqin Fu, Shuijing Yu

Antonie van Leeuwenhoek · 2020 · 38 citations · 72 references

DOI

Concepts

References

72

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text

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MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

Sudhir Kumar, Glen Stecher, Michael Li et al. · Molecular Biology and Evolution · 2018 · 38.8K citations · Full text

, , +11

Fast and sensitive protein alignment using DIAMOND

Benjamin Buchfink, Chao Xie, Daniel H. Huson · Nature Methods · 2014 · 15.2K citations

, , +8

Genome sequence-based species delimitation with confidence intervals and improved distance functions

Jan P. Meier‐Kolthoff, Alexander F. Auch, Hans-Peter Klenk et al. · BMC Bioinformatics · 2013 · 6.7K citations · Full text

, , +17

Shifting the genomic gold standard for the prokaryotic species definition

Michael Richter, Ramon Rosselló‐Móra · Proceedings of the National Academy of Sciences · 2009 · 6.3K citations · Full text

, , +13