Cell · 2020 · 251 citations · 41 references
Life SciencesMicrobiologyMolecular BiologyHost-pathogen InteractionsMolecular ImmunologySignal TransductionBacterial ImmunologyBacteriophage GeneticsInnate Immune RecognitionInnate Immune ResponsePathogen RecognitionPhage GeneticsPathogen Recognition Receptor SignalingPhage Anti-defense GenesPhage Defense EvasionPhage Host SpecificityPhage InfectionPhage ReceptorsPhage-encoded Virulence GenesPhage-host Interaction Genetics
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Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text