Dissecting the cellular specificity of smoking effects and reconstructing lineages in the human airway epithelium

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Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 34K citations · Full text

Genetics, Genomics, High Throughput Sequencing +17

HTSeq—a Python framework to work with high-throughput sequencing data

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Comprehensive Integration of Single-Cell Data

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Engineering, Biomedical Data Integration, Data Science +11

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.1K citations · Full text

Engineering, Genetics, Multiomics +17