Concepedia

Carbohydrate – Protein aromatic ring interactions beyond CH/π interactions: A Protein Data Bank survey and quantum chemical calculations

Ivana M. Stanković, Jelena P. Blagojević Filipović, Snežana D. Zarić

International Journal of Biological Macromolecules · 2020 · 19 citations · 36 references

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36

VMD: Visual molecular dynamics

William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations

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<i>PHENIX</i>: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams, Pavel V. Afonine, G. Bunkóczi et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 24.5K citations · Full text

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The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors

Samuel Francis Boys, Fernando Bernardi · Molecular Physics · 1970 · 22K citations

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MDAnalysis: A toolkit for the analysis of molecular dynamics simulations

Naveen Michaud‐Agrawal, Elizabeth J. Denning, Thomas B. Woolf et al. · Journal of Computational Chemistry · 2011 · 4.6K citations · Full text

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Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation 1 1Edited by J. Thornton

J. Michael Word, Simon C. Lovell, Jane S. Richardson et al. · Journal of Molecular Biology · 1999 · 1.5K citations

, , +14