MADOKA: an ultra-fast approach for large-scale protein structure similarity searching

Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features

Wolfgang Kabsch, Christian Sander · Biopolymers · 1983 · 15.5K citations

SCOP: A structural classification of proteins database for the investigation of sequences and structures

Alexey G. Murzin, Steven E. Brenner, Tim Hubbard et al. · Journal of Molecular Biology · 1995 · 6.3K citations

Structural Classification, Structural Bioinformatics, Proteins Database +13

Protein Structure Comparison by Alignment of Distance Matrices

Liisa Holm, Chris Sander · Journal of Molecular Biology · 1993 · 4K citations

Structural Bioinformatics, Protein Folding, Protein Structure Comparison +6

TM-align: a protein structure alignment algorithm based on the TM-score

Yang Zhang · Nucleic Acids Research · 2005 · 3.8K citations · Full text

A solution for the best rotation to relate two sets of vectors

Wolfgang Kabsch · Acta Crystallographica Section A · 1976 · 3.1K citations

Mathematical Programming, Geometric Modeling, Large-scale Global Optimization +13