Concepedia

Protein Structural Alignment

Protein Structural Alignment is a computational method in structural bioinformatics that establishes residue-level correspondences between two or more protein structures based on their three-dimensional conformations, distinguished from sequence-based alignment techniques by its reliance on spatial topology rather than amino acid sequence similarity.

546

Publications

57.9K

Citations

1.4K

Authors

588

Institutions

Publications per year

2017–2026

54

Variants

3D Protein Alignment

Parents

Publications

546

TM-align: a protein structure alignment algorithm based on the TM-score

Yang Zhang · Nucleic Acids Research · 2005 · 4K citations · Full text

, , +15

Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

Eugene Krissinel, K. Henrick · Acta Crystallographica Section D Biological Crystallography · 2004 · 3.8K citations · Full text

, , +13

Clustal Omega for making accurate alignments of many protein sequences

Fabian Sievers, Desmond G. Higgins · Protein Science · 2017 · 2.2K citations · Full text

, , +12

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

Ilya N. Shindyalov, Philip E. Bourne · Protein Engineering Design and Selection · 1998 · 2.1K citations

, , +15

ESPript/ENDscript: extracting and rendering sequence and 3D information from atomic structures of proteins

Patrice Gouet · Nucleic Acids Research · 2003 · 1.5K citations · Full text

, , +13

1–5 of 546

Authors

1.4K

  1. HJ
    Haim J. Wolfson

    Tel Aviv University, Israel

    10 publications · 1.1K citations

    10

    h-index

  2. YZ
    Yang Zhang

    University of Michigan, United States

    10 publications · 5.4K citations

    10

    h-index

  3. RN
    Ruth Nussinov

    Tel Aviv University, Israel

    10 publications · 1.1K citations

    10

    h-index

  4. WR
    William R. Taylor

    National Institute for Medical Research, Tanzania

    10 publications · 884 citations

    10

    h-index

  5. PE
    Philip E. Bourne

    University of California San Diego, United States

    9 publications · 3.7K citations

    9

    h-index

1–5 of 1.4K

Institutions

588

  1. Stanford University

    Stanford, United States

    14 h-index

    26 publications

    4.3K citations

  2. University of California San Diego

    San Diego, United States

    14 h-index

    63 publications

    23.5K citations

  3. National Institutes of Health

    Bethesda, United States

    13 h-index

    49 publications

    4.7K citations

  4. Inserm

    Paris, France

    12 h-index

    26 publications

    1.3K citations

  5. San Diego Supercomputer Center

    San Diego, United States

    11 h-index

    57 publications

    23.7K citations

  6. Indian Institute of Science Bangalore

    Bengaluru, India

    11 h-index

    24 publications

    1.2K citations

  7. National Center for Biotechnology Information

    Bethesda, United States

    11 h-index

    42 publications

    3.9K citations

  8. Tel Aviv University

    Tel Aviv, Israel

    10 h-index

    24 publications

    3K citations

1–8 of 588

Venues

  1. Proteins Structure Function and Bioinformatics

    61 publications · 6.8K citations

    41

    h-index

  2. Nucleic Acids Research

    49 publications · 13.7K citations

    34

    h-index

  3. Bioinformatics

    69 publications · 5.3K citations

    33

    h-index

  4. Protein Science

    PS · 32 publications · 6.1K citations

    28

    h-index

  5. BMC Bioinformatics

    27 publications · 1.1K citations

    20

    h-index

1–5