Concepedia

Protein Sequence Search

Protein Sequence Search is a computational method within sequence similarity search that identifies biologically relevant protein sequences by comparing query amino acid sequences against biological databases based on sequence homology and evolutionary relationships.

1.1K

Publications

234.1K

Citations

3.4K

Authors

1K

Institutions

Publications per year

2017–2026

136

Parents

Publications

1.1K

Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

, , +14

The Pfam Protein Families Database

Alex Bateman · Nucleic Acids Research · 2002 · 14.2K citations · Full text

, , +16

A general method applicable to the search for similarities in the amino acid sequence of two proteins

Saul B. Needleman, Christian D. Wunsch · Journal of Molecular Biology · 1970 · 11.5K citations

, , +13

UniProt: the Universal Protein knowledgebase

Rolf Apweiler · Nucleic Acids Research · 2003 · 7.8K citations · Full text

, , +11

Amino acid substitution matrices from protein blocks.

Steven Henikoff, Jorja G. Henikoff · Proceedings of the National Academy of Sciences · 1992 · 6.4K citations

, , +16

1–5 of 1.1K

Authors

3.4K

  1. WR
    William R. Pearson

    University of Virginia, United States

    13 publications · 6K citations

    13

    h-index

  2. JS
    Johannes Söding

    Max Planck Institute for Biophysical Chemistry, Germany

    12 publications · 18.5K citations

    12

    h-index

  3. AB
    Alex Bateman

    European Bioinformatics Institute, United Kingdom

    12 publications · 30.2K citations

    12

    h-index

  4. RL
    Rodrigo López

    European Bioinformatics Institute, United Kingdom

    10 publications · 8.4K citations

    10

    h-index

  5. SH
    Steven Henikoff

    Fred Hutch Cancer Center, United States

    10 publications · 8.3K citations

    10

    h-index

1–5 of 3.4K

Institutions

1K

  1. European Bioinformatics Institute

    Cambridge, United Kingdom

    32 h-index

    185 publications

    108.1K citations

  2. National Institutes of Health

    Bethesda, United States

    29 h-index

    149 publications

    78.9K citations

  3. National Center for Biotechnology Information

    Bethesda, United States

    26 h-index

    134 publications

    84.3K citations

  4. Wellcome Trust

    London, United Kingdom

    23 h-index

    128 publications

    93.7K citations

  5. Wellcome Sanger Institute

    Cambridge, United Kingdom

    20 h-index

    55 publications

    86K citations

  6. Centre National de la Recherche Scientifique

    Paris, France

    17 h-index

    63 publications

    4.7K citations

  7. Howard Hughes Medical Institute

    Chevy Chase, United States

    17 h-index

    52 publications

    82.7K citations

  8. Stanford University

    Stanford, United States

    15 h-index

    25 publications

    3.7K citations

1–8 of 1K

Venues

  1. Nucleic Acids Research

    167 publications · 97.1K citations

    82

    h-index

  2. Bioinformatics

    120 publications · 40.1K citations

    46

    h-index

  3. Computer applications in the biosciences

    CABIOS · 38 publications · 3.2K citations

    26

    h-index

  4. BMC Bioinformatics

    43 publications · 5.3K citations

    24

    h-index

  5. Proceedings of the National Academy of Sciences

    PNAS · 24 publications · 13.8K citations

    23

    h-index

1–5