Concepedia

Monitoring of marine nematode communities through 18S rRNA metabarcoding as a sensitive alternative to morphology

Bjorn Tytgat, Dinh Tu Nguyen, Thi Xuan Phuong Nguyen, Thi Man Pham, Phan Ke Long, Ann Vanreusel, Sofie Derycke

Ecological Indicators · 2019 · 31 citations · 74 references

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74

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

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Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al. · Nucleic Acids Research · 2012 · 34K citations · Full text

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Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin et al. · Applied and Environmental Microbiology · 2009 · 21.8K citations · Full text

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Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

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