Nature Communications · 2019 · 95 citations · 56 references
Life SciencesBiologyEvolutionary BiologyGenome EvolutionMicroevolutionMolecular EvolutionCoevolution Of MicrobesEvolutionGenetic DriftHost-microbe CoevolutionMolecular Evolution In MicrobesNatural SelectionCoevolutionary GeneticsConditional Gene ExpressionGenomic Signatures Of Coevolution
Conflict is thought to play a critical role in the evolution of social interactions by promoting diversity or driving accelerated evolution. However, despite our sophisticated understanding of how conflict shapes social traits, we have limited knowledge of how it impacts molecular evolution across the underlying social genes. Here we address this problem by analyzing the genome-wide impact of social interactions using genome sequences from 67 Dictyostelium discoideum strains. We find that social genes tend to exhibit enhanced polymorphism and accelerated evolution. However, these patterns are not consistent with conflict driven processes, but instead reflect relaxed purifying selection. This pattern is most likely explained by the conditional nature of social interactions, whereby selection on genes expressed only in social interactions is diluted by generations of inactivity. This dilution of selection by inactivity enhances the role of drift, leading to increased polymorphism and accelerated evolution, which we call the Red King process.
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Trimmomatic: a flexible trimmer for Illumina sequence data
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The variant call format and VCFtools
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Life Sciences, Biology, Genetics +13