Concepedia

Altered differentiation is central to HIV-specific CD4+ T cell dysfunction in progressive disease

Antigoni Morou, Elsa Brunet‐Ratnasingham, Mathieu Dubé, Roxanne Charlebois, Eloi Mercier, Samuel Darko, Nathalie Brassard, Krystelle Nganou‐Makamdop, Sahaana Arumugam, Gabrielle Gendron‐Lepage,

Nature Immunology · 2019 · 108 citations · 43 references

DOI

Concepts

References

43

Basic local alignment search tool

Stephen F. Altschul, Warren Gish, Webb Miller et al. · Journal of Molecular Biology · 1990 · 94.5K citations

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Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

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STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text

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limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie, Belinda Phipson, Di Wu et al. · Nucleic Acids Research · 2015 · 43K citations · Full text

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