UCSF Chimera—A visualization system for exploratory research and analysis

Eric F. Pettersen, Thomas D. Goddard, Conrad C. Huang, +4

Journal of Computational Chemistry

Interactive VisualizationExtensible Visualization SystemUcsf ChimeraEngineeringData Science +13

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura, Daniel G. Peterson, Nora Peterson, +3

Molecular Biology and Evolution

Maximum Parsimony MethodsComparative GenomicsGeneticsGenomicsPhylogenetic Analysis +18

Features and development of <i>Coot</i>

Paul Emsley, Bernhard Lohkamp, W. G. Scott, +1

Acta Crystallographica Section D Biological Crystallography

SyntaxModel ValidationEngineeringVisual Programming LanguageMedicine +13

<i>PHENIX</i>: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams, Pavel V. Afonine, G. Bunkóczi, +15

Acta Crystallographica Section D Biological Crystallography

X-ray CrystallographyStructural BioinformaticsBiomolecular Structure PredictionNatural SciencesMedicine +12

<i>MolProbity</i>: all-atom structure validation for macromolecular crystallography

Vincent B. Chen, W.B. Arendall, Jeffrey J. Headd, +6

Acta Crystallographica Section D Biological Crystallography

X-ray CrystallographyCrystal StructureStructural BioinformaticsBiomolecular Structure PredictionMolecular Biology +14

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

Shawn Zheng, Eugene Palovcak, Jean‐Paul Armache, +3

Nature Methods

Electron MicroscopyPhysicsMicroscopyMicroscopy MethodApplied Physics +4

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

Sjors H. W. Scheres

Journal of Structural Biology

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

Alexis Rohou, Nikolaus Grigorieff

Journal of Structural Biology

Electron MicroscopyPhysicsMedical ImagingMicroscopyMicroscope Image Processing +3

EMAN2: An extensible image processing suite for electron microscopy

Guang Yi Tang, Liwei Peng, Philip R. Baldwin, +4

Journal of Structural Biology

Electron MicroscopyMicroscope Image ProcessingMicroscopyBiomedical ImagingElectron Microscope +2

Isolation of a Common Receptor for Coxsackie B Viruses and Adenoviruses 2 and 5

Jeffrey M. Bergelson, Jennifer Cunningham, Gustavo Droguett, +6

Science

Virus StructureMolecular VirologyPathogenesisImmunologyCoxsackie B Viruses +12