Concepedia

Visualization of microbes by 16S in situ hybridization in term and preterm placentas without intraamniotic infection

Maxim D. Seferovic, Ryan M. Pace, Matthew R. Carroll, Benjamin D. W. Belfort, Angela M. Major, Derrick Chu, Diana Racusin, Eumenia Castro, Kenneth L. Muldrew, James Versalovic,

American Journal of Obstetrics and Gynecology · 2019 · 128 citations · 92 references

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92

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

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Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text

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phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

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Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

Morgan G. I. Langille, Jesse Zaneveld, J. Gregory Caporaso et al. · Nature Biotechnology · 2013 · 9.4K citations · Full text

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