Concepedia

A Forward Chemical Genetic Screen Reveals Gut Microbiota Metabolites That Modulate Host Physiology

Haiwei Chen, Phu-Khat Nwe, Yi Yang, Connor Rosen, Agata A. Bielecka, Manik Kuchroo, Gary W. Cline, Andrew C. Kruse, Aaron M. Ring, Jason M. Crawford,

Cell · 2019 · 342 citations · 44 references

DOIFull text

Open access

Concepts

References

44

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

, , +13

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

, , +9

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

, , +17

The RAST Server: Rapid Annotations using Subsystems Technology

Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text

, , +14

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic T <sub>reg</sub> Cell Homeostasis

Patrick M. Smith, Michael R. Howitt, Nicolai Panikov et al. · Science · 2013 · 5.3K citations · Full text

, , +17