Concepedia

Enhancer Architecture and Essential Core Regulatory Circuitry of Chronic Lymphocytic Leukemia

Christopher J. Ott, Alexander Federation, Logan S. Schwartz, Siddha Kasar, Josephine L. Klitgaard, Romina Lenci, Qiyuan Li, Matthew A. Lawlor, Stacey M. Fernandes, Amanda Souza,

Cancer Cell · 2018 · 174 citations · 72 references

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72

R: A Language and Environment for Statistical Computing

R Core Team · 2000 · 353K citations · Full text

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

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HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 26.1K citations · Full text

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Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

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