Concepedia

Expression of pseudorabies virus-encoded long noncoding RNAs in epithelial cells and neurons

Xiang Guan, Jie Liu, Hui Jiang, Chang-Xian Wu, Huanchun Chen, Zheng‐Fei Liu

Journal of NeuroVirology · 2018 · 11 citations · 40 references

DOI

Concepts

References

40

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text

, , +17

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

, , +14

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

, , +16

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text

, , +10

Circular Intronic Long Noncoding RNAs

Yang Zhang, Xiao‐Ou Zhang, Jian‐Feng Xiang et al. · Molecular Cell · 2013 · 2.3K citations · Full text

, , +11