Concepedia

RNA-seq analysis identifies different transcriptomic types and developmental trajectories of primary melanomas

Manfred Kunz, Henry Loeffler‐Wirth, Michael Dannemann, Edith Willscher, Gero Doose, Janet Kelso, Tina Kottek, Birgit Nickel, Lydia Hopp, Jenny Landsberg,

Oncogene · 2018 · 117 citations · 44 references

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44

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha et al. · Proceedings of the National Academy of Sciences · 2005 · 56.7K citations · Full text

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The Molecular Signatures Database Hallmark Gene Set Collection

Arthur Liberzon, Chet Birger, Helga Thorvaldsdóttir et al. · Cell Systems · 2015 · 14.5K citations · Full text

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Integrative analysis of 111 reference human epigenomes

Anshul Kundaje, Wouter Meuleman, Jason Ernst et al. · Nature · 2015 · 7.1K citations · Full text

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Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

Itay Tirosh, Benjamin Izar, Sanjay M. Prakadan et al. · Science · 2016 · 5.2K citations · Full text

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