Journal of Microbiological Methods · 2018 · 38 citations · 32 references
Long-read SequencingSequence AssemblyDna SequencingEngineeringGeneticsMolecular BiologySynthetic BiologyGenomicsSequence AlignmentPractical EvaluationMedicineBioinformaticsBiomolecular EngineeringHigh Throughput Sequencing
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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
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QUAST: quality assessment tool for genome assemblies
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Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
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SOAPdenovo2: an empirically improved memory-efficient short-read <i>de novo</i> assembler
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metaSPAdes: a new versatile metagenomic assembler
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Polymorphic Diploid Genomes, Sequence Assembly, Long-read Sequencing +13